The detailed information of tRNA gene sequence


Sequence ID>WENV170018169
Genome IDBARV01021379
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 419
End posion on genome 512
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acttttaaat
tRNA gene sequence 
GGAGAGATGACCGAGTGGCCGAAGGTGGTTGCCTGCTAAGCAATTGAGCGGGTTAAGGCC
TGCTCCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tttcttatag
Secondary structure (Cloverleaf model)
>WENV170018169	Ser	GCT
                   t      GCCA tttcttatag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGAGCGGGTTAAGGCCTGCTCC
                    G + T
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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