The detailed information of tRNA gene sequence


Sequence ID>WENV170018177
Genome IDBARV01021937
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 282
End posion on genome 374
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aggattgctC
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCAACGGTTTGCTAAACCGTCGTATGGGTGAACGCC
CGTACCGCGGGTTCGAATCCCGCCCTCTCCGTtg
Downstream region at tRNA end position 
gtttttaaat
Secondary structure (Cloverleaf model)
>WENV170018177	Ser	GCT
                   C      GTtg gtttttaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CGTATGGGTGAACGCCCGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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