The detailed information of tRNA gene sequence


Sequence ID>WENV170018178
Genome IDBARV01022135
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 228
End posion on genome 302
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
actccatagG
tRNA gene sequence 
GCCAGCGTAGCTCAGTTGGTAGAGCAACTGATTCGTAATCAGTAGGTCGGAGGTTCGACT
CCTCTCGCTGGCTTtc
Downstream region at tRNA end position 
tttttgaggg
Secondary structure (Cloverleaf model)
>WENV170018178	Thr	CGT
                   G      TTtc tttttgaggg
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T C
                    T     T C T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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