The detailed information of tRNA gene sequence


Sequence ID>WENV170018184
Genome IDBARV01022961
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 185
End posion on genome 260
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
atatgtcttt
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTAGAGCGTTGGTTTCACATACCAGAGGTCAGAGGTTCAAGT
CCTCTACCGCCCACCA
Downstream region at tRNA end position 
ttcacctcat
Secondary structure (Cloverleaf model)
>WENV170018184	Val	CAC
                   t      ACCA ttcacctcat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T G
                    T     T C T C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T + G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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