The detailed information of tRNA gene sequence


Sequence ID>WENV170018190
Genome IDBARV01023695
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 575
End posion on genome 501
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gcttttgttt
tRNA gene sequence 
CGGGGTGTAGCGCAGCTTGGCAGCGCACCTGCTTTGGGAGCAGGGGGTCGGAGGTTCAAA
TCCTCTCGCCCCGACtt
Downstream region at tRNA end position 
tgcgggaata
Secondary structure (Cloverleaf model)
>WENV170018190	Pro	TGG
                   t      ACtt tgcgggaata
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     A
    T       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G C A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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