The detailed information of tRNA gene sequence


Sequence ID>WENV170018195
Genome IDBARV01023794
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 238
End posion on genome 314
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
atcactcagt
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTTAGAGCACTGCGTTGACATCGCAGAGGTCACTGGTTCGAG
CCCAGTATCGCCCACCA
Downstream region at tRNA end position 
ttttggtaat
Secondary structure (Cloverleaf model)
>WENV170018195	Val	GAC
                   t      ACCA ttttggtaat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G + T
                     T - A          C G
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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