The detailed information of tRNA gene sequence


Sequence ID>WENV170018197
Genome IDBARV01023996
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 133
End posion on genome 37
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
taataactta
tRNA gene sequence 
GGGAGCGGTTGAGTCCCGGTGGGCTTCGCGGACTTCAAATCCGTCGGGGGGCATTAATAG
TGTCTTCGGTGGGTTCGACTCCCATGCGCTCCCGCCA
Downstream region at tRNA end position 
cccactacct
Secondary structure (Cloverleaf model)
>WENV170018197	SeC(p)	TCA
                   a      GCCA cccactacct
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G   G          T C
                    T     T A C C C     A
      C C C        T      + | | | |     G
    G       T G A G       G T G G G     C
    G       + | | +                 T T
    T       G C T T
      G G          C     CGGGGGGCATTAATAGTGTCTTCG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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