The detailed information of tRNA gene sequence


Sequence ID>WENV170018199
Genome IDBARV01024102
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 627
End posion on genome 553
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aattgataaT
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGGGGGTTCGATT
CCCTTCTGGCCTGAgt
Downstream region at tRNA end position 
tgaagcgtat
Secondary structure (Cloverleaf model)
>WENV170018199	Trp	CCA
                   T      GAgt tgaagcgtat
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     T T C C C     A
      T A A        A      + + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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