The detailed information of tRNA gene sequence


Sequence ID>WENV170018208
Genome IDBARV01025209
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 355
End posion on genome 278
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ccgctccatg
tRNA gene sequence 
GTGAGCGTAGCTCAGTCTGGTTAGAGCGCTGGACTGTGGCTCCAGTGGTCGGGGGTTCAA
ATCCCCTCGCTCACCCCA
Downstream region at tRNA end position 
ttttcaaaaa
Secondary structure (Cloverleaf model)
>WENV170018208	His	GTG
                   g      CCCA ttttcaaaaa
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T C C C C     A
    C T G A        A      + | | | |     A
  T         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     TGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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