The detailed information of tRNA gene sequence


Sequence ID>WENV170018219
Genome IDBARV01026398
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 619
End posion on genome 545
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gggtttttgt
tRNA gene sequence 
CGCGGGGTAGAGCAGTGGAAGCTCGTCGGGCTCATAACCCGGAGGTCGTTGGTTCAAATC
CAACCCCCGCTACCA
Downstream region at tRNA end position 
atgaaaataa
Secondary structure (Cloverleaf model)
>WENV170018219	Met	CAT
                   t      ACCA atgaaaataa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A A C C     A
        G A        A      | | | | |     A
      T     C G A G       G T T G G     C
      G     | | | |                 T T
      G     G C T C
        A A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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