The detailed information of tRNA gene sequence


Sequence ID>WENV170018227
Genome IDBARV01027051
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 519
End posion on genome 448
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
taaagattag
tRNA gene sequence 
GCGCTCTTAGTATAGTGGTTAGAATTTCGGGTTTCCAACCCGATGACCCGGGTTCAATTC
CCGGAGGGCGCAttt
Downstream region at tRNA end position 
ttaaacgaca
Secondary structure (Cloverleaf model)
>WENV170018227	Gly	TCC
                   g      Attt ttaaacgaca
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     C - G
                     T - A          T T
                    T     G G C C C     A
      T G A        A      | | | | |     A
    G       T A T G       C C G G G     C
    G       +   | +                 T T
    T       G A A T
      T A          T     TGAC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  T       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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