The detailed information of tRNA gene sequence


Sequence ID>WENV170018248
Genome IDBARV01030496
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 95
End posion on genome 21
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cttgttgggt
tRNA gene sequence 
AGGAGTGTAGCTCAGTTTGGGAGAGCAGCGGTCTCCAAAACCGCAGGGCGGGGGTTCGAG
TCCCTCCACTCCTGCtt
Downstream region at tRNA end position 
tgtttcccct
Secondary structure (Cloverleaf model)
>WENV170018248	Trp	CCA
                   t      GCtt tgtttcccct
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        A     AGGGC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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