The detailed information of tRNA gene sequence


Sequence ID>WENV170018251
Genome IDBARV01030989
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 114
End posion on genome 205
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caaaattgcg
tRNA gene sequence 
GGAGAGGTGACTGAGTGGTTGAAAGTGCACGATTGGAAATCGTGTAGGGGGTTAAAGCCT
CCTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gttcaaccaa
Secondary structure (Cloverleaf model)
>WENV170018251	Ser	GGA
                   g      GCCA gttcaaccaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C A       G A G G G     C
    G         | | |                 T T
    T       A A G T
      T G A        G     TAGGGGGTTAAAGCCTCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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