The detailed information of tRNA gene sequence


Sequence ID>WENV170018253
Genome IDBARV01031150
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 91
End posion on genome 15
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
attatcattt
tRNA gene sequence 
GGGGACATAGCTCAGTTGGTTAGAGTGCCTGGATCACAACCAGGAGGTCTACGGTTCAAA
TCCGTATGTCCCCACCA
Downstream region at tRNA end position 
tttttaatat
Secondary structure (Cloverleaf model)
>WENV170018253	Val	CAC
                   t      ACCA tttttaatat
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     A T G C C     A
      T G A        A      | | | | |     A
    T       C T C G       T A C G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  A       A
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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