The detailed information of tRNA gene sequence


Sequence ID>WENV170018258
Genome IDBARV01031322
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 599
End posion on genome 509
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaagccctaa
tRNA gene sequence 
GGAGGGGTGTCCGAATTGGCAAGGAGCCGGTCTTGAAAACCGGTGAAAGGCAGCGATGCC
CGTCTGGGTTCGAGTCCCAGCCCCTCCGCCA
Downstream region at tRNA end position 
gtgcaaccaa
Secondary structure (Cloverleaf model)
>WENV170018258	Ser	TGA
                   a      GCCA gtgcaaccaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     G A C C C     A
      T A A        G      | | | | |     G
    T       G C C T       C T G G G     C
    G         | | |                 T T
    G       A G G A
      C A          G     TGAAAGGCAGCGATGCCCGT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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