The detailed information of tRNA gene sequence


Sequence ID>WENV170018260
Genome IDBARV01031619
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 543
End posion on genome 454
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaactgccat
tRNA gene sequence 
GGAGGGGTGTCCGAGTGGTCTATGGTGACGGTCTTGAAAACCGTTGTTCCCGCAAGGGGA
CCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
ctaatcacgt
Secondary structure (Cloverleaf model)
>WENV170018260	Ser	TGA
                   t      GCCA ctaatcacgt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G       + | |                   T T
    T       T G G T
      C T A        G     TGTTCCCGCAAGGGGACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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