The detailed information of tRNA gene sequence


Sequence ID>WENV170018264
Genome IDBARV01032508
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 642
End posion on genome 735
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cagatagtgt
tRNA gene sequence 
GGAGAGATGGCTGAGCTGGTTGAAAGCGCTTGACTCGAAATCGAGTGTACTGCTAAAAGC
GGTACCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
agctaaatca
Secondary structure (Cloverleaf model)
>WENV170018264	Ser	CGA
                   t      GCCA agctaaatca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       G T G G G     C
  G           | | |                 T T
  T         A A G C
    T G A          G     TGTACTGCTAAAAGCGGTACC
                    C - G
                    T - A
                    T + G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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