The detailed information of tRNA gene sequence


Sequence ID>WENV170018272
Genome IDBARV01033986
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 302
End posion on genome 215
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
atagagatag
tRNA gene sequence 
GCCGCGGTGGCGGAATTGGTTTACGCGCAGCTCTCAAAAAGCTGTCCTGCTAAGCAGGGT
GTGGGTTCGAGTCCCACCCGCGGCACTA
Downstream region at tRNA end position 
ttttaagaaa
Secondary structure (Cloverleaf model)
>WENV170018272	Leu	CAA
                   g      ACTA ttttaagaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    T       G G C G       G T G G G     C
    G         | | |                 T T
    G       A C G C
      T T T        G     TCCTGCTAAGCAGGGT
                    C - G
                    A - T
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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