The detailed information of tRNA gene sequence


Sequence ID>WENV170018274
Genome IDBARV01034108
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 184
End posion on genome 111
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aattgatacg
tRNA gene sequence 
GGGCTCGTAGCTCAGTTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTAGTTCGAA
TCTACCCGGGCCCAttc
Downstream region at tRNA end position 
aatttactat
Secondary structure (Cloverleaf model)
>WENV170018274	Ile	GAT
                   g      Attc aatttactat
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     C C A T C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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