The detailed information of tRNA gene sequence


Sequence ID>WENV170018289
Genome IDBARV01036751
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 572
End posion on genome 661
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaatcgtctC
tRNA gene sequence 
GGAGAGGTGTCGGAGTGGCTTATCGAGCAGCCTTGGAAAGGCTGTGTAGGGCTTGTCCCT
ACCGCGGGTTCGAATCCCGCCCTCTCCGTta
Downstream region at tRNA end position 
agttcagtta
Secondary structure (Cloverleaf model)
>WENV170018289	Ser	GGA
                   C      GTta agttcagtta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G G C T       G C G G G     C
    G       + | | |                 T T
    C       T C G A
      T T A        G     TGTAGGGCTTGTCCCTACC
                    C - G
                    A - T
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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