The detailed information of tRNA gene sequence


Sequence ID>WENV170018292
Genome IDBARV01037405
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 616
End posion on genome 523
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgaagtagtc
tRNA gene sequence 
GGAGAGGTGCTTGAGTGGCTGAAAAGGGAAGTTTGCTAAACTTCTATAGGGTGTAATAGC
CCTATCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tttttatttt
Secondary structure (Cloverleaf model)
>WENV170018292	Ser	GCT
                   c      GCCA tttttatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T T C       G T G G G     C
    G         | | |                 T T
    C       A A A G
      T G A        G     TATAGGGTGTAATAGCCCTATC
                    G - C
                    A - T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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