The detailed information of tRNA gene sequence


Sequence ID>WENV170018293
Genome IDBARV01037405
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 509
End posion on genome 419
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttatttttat
tRNA gene sequence 
GGAGGGGTGCGAGAGTGGATGAATCGGCCGCACTTGAAATGCGGTAGGGCAGAAATGTCC
CTCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
cctgggattt
Secondary structure (Cloverleaf model)
>WENV170018293	Ser	TGA
                   t      GCCA cctgggattt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G         | | |                 T T
    A       A T C G
      T G A        G     TAGGGCAGAAATGTCCCTC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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