The detailed information of tRNA gene sequence


Sequence ID>WENV170018298
Genome IDBARV01038804
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 36
End posion on genome 112
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tctaaaacaa
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCATAGGTTCAAA
TCCTATCCCCGCTACCA
Downstream region at tRNA end position 
aattttaaga
Secondary structure (Cloverleaf model)
>WENV170018298	Met	CAT
                   a      ACCA aattttaaga
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A T C C     A
      T G A        G      | | | | |     A
    C       C G A G       A T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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