The detailed information of tRNA gene sequence


Sequence ID>WENV170018302
Genome IDBARV01040939
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 64
End posion on genome 136
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttaaccttga
tRNA gene sequence 
GGGCCTGTAGCTCAGTGGTAGAGCGTCGGCTTTGCAAGCCGAAGGTCCCGGGTTCGAGTC
CCGGCAGGTCCACtc
Downstream region at tRNA end position 
tcgccgcaga
Secondary structure (Cloverleaf model)
>WENV170018302	Ala	TGC
                   a      ACtc tcgccgcaga
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     G G C C C     A
        G A        A      | | | | |     G
      T     C T C G       C C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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