The detailed information of tRNA gene sequence


Sequence ID>WENV170018306
Genome IDBARV01043170
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 184
End posion on genome 95
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtctttgcct
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTTGAATGCGGCGGTCTTGAAAACCGTTGAAGGTTTTTATCTT
CCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tgaagataat
Secondary structure (Cloverleaf model)
>WENV170018306	Ser	TGA
                   t      GCCA tgaagataat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TGAAGGTTTTTATCTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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