The detailed information of tRNA gene sequence


Sequence ID>WENV170018307
Genome IDBARV01043574
Search identical group
Phylum/Class[BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 143
End posion on genome 216
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttgcatgtaa
tRNA gene sequence 
GGCGGCATAGCCAAGTGGTAAGGCGGAGGTCTGCAAAACCTTTATCCCCGGTTCGAATCC
GGGTGCCGCCTCCA
Downstream region at tRNA end position 
ggttttgtgt
Secondary structure (Cloverleaf model)
>WENV170018307	Cys	GCA
                   a      TCCA ggttttgtgt
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G G G C C     A
        G A        A      | | | | |     G
      T     A C C G       C C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TATC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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