The detailed information of tRNA gene sequence


Sequence ID>WENV170018334
Genome IDBARW01002310
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 772
End posion on genome 697
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
atatgatttt
tRNA gene sequence 
GGGCGGTTAGCTCAGTGGTTAGAGTGCTTGCTTCACACGCAGGAGGTCACTGGTTCAAGT
CCAGTACCGCCCACCA
Downstream region at tRNA end position 
tagtgtacaa
Secondary structure (Cloverleaf model)
>WENV170018334	Val	CAC
                   t      ACCA tagtgtacaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    G       C T C G       A C T G G     C
    G       | | | +                 T T
    T       G A G T
      T A          G     AGGTC
                    C - G
                    T + G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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