The detailed information of tRNA gene sequence


Sequence ID>WENV170018351
Genome IDBARW01004164
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 531
End posion on genome 445
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aattattagt
tRNA gene sequence 
GGAGAGGTGCTGGAGTGGTCTATCAGGCGCGCCTGGAGAGCGCGTGTAGCCTTTGGCTAC
CGTGGGTTCGAATCCCACCCTCTCCGCtg
Downstream region at tRNA end position 
tttctcgccc
Secondary structure (Cloverleaf model)
>WENV170018351	Ser	GGA
                   t      GCtg tttctcgccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G T C       G T G G G     C
    G       + | | |                 T T
    T       T C A G
      C T A        G     TGTAGCCTTTGGCTACC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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