The detailed information of tRNA gene sequence


Sequence ID>WENV170018360
Genome IDBARW01005516
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 471
End posion on genome 396
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atagcggtgT
tRNA gene sequence 
CGCGGGGTGGAGCAGTTGGTCAGCTCGTCGGCCTCATAAGCCGAAGGTCGTGGGTTCGAA
TCCCACCCCCGCTAGac
Downstream region at tRNA end position 
cagaaatagc
Secondary structure (Cloverleaf model)
>WENV170018360	Met	CAT
                   T      AGac cagaaatagc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    T       C G A G       G T G G G     C
    G       | | | |                 T T
    G       G C T C
      T C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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