The detailed information of tRNA gene sequence


Sequence ID>WENV170018361
Genome IDBARW01005577
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 583
End posion on genome 491
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaattactC
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCAACGGTTTGCTAAACCGTCGTACGGGTATAAGCC
CGTACCGCGGGTTCGAATCCCGCCCTCTCCGTtt
Downstream region at tRNA end position 
ttgttgtcaa
Secondary structure (Cloverleaf model)
>WENV170018361	Ser	GCT
                   C      GTtt ttgttgtcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CGTACGGGTATAAGCCCGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK