The detailed information of tRNA gene sequence


Sequence ID>WENV170018362
Genome IDBARW01005792
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 288
End posion on genome 212
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttagtacatg
tRNA gene sequence 
GGGAGTGTAGCTCAGCTTGGGAGAGCGGTGGTCTCCAAAACCATAGGTCGGGGGTTCGAA
TCCTCCCACTCCCGCAA
Downstream region at tRNA end position 
ctgcaaggtg
Secondary structure (Cloverleaf model)
>WENV170018362	Trp	CCA
                   g      GCAA ctgcaaggtg
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C C T C C     A
      C G A        A      | | + | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        G     AGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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