The detailed information of tRNA gene sequence


Sequence ID>WENV170018363
Genome IDBARW01005812
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 421
End posion on genome 513
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcctttttcg
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTCGAAAGCGATTGATTCGAAATCAATTGAGTGCCTCAAAGGT
GCTCCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gtnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170018363	Ser	CGA
                   g      GCCA gtnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGAGTGCCTCAAAGGTGCTCC
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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