The detailed information of tRNA gene sequence


Sequence ID>WENV170018387
Genome IDBARW01007598
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 464
End posion on genome 372
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgcctttttg
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTCGAAAGCGATTGATTCGAAATCAATTGAGTGCCTCAAAGGT
GCTCCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gtgcaaccaa
Secondary structure (Cloverleaf model)
>WENV170018387	Ser	CGA
                   g      GCCA gtgcaaccaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGAGTGCCTCAAAGGTGCTCC
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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