The detailed information of tRNA gene sequence


Sequence ID>WENV170018393
Genome IDBARW01008257
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 1029
End posion on genome 945
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccttattttT
tRNA gene sequence 
GGAGGGCTAGTCCTAATGGTAAGGCAGCGGTCTTGAAAACCGCCGGGAGTAATCCCTTGG
GGGTTCGAATCCCTCGCCCTCCGTta
Downstream region at tRNA end position 
ttagggaaca
Secondary structure (Cloverleaf model)
>WENV170018393	Ser	TGA
                   T      GTta ttagggaaca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C C T G       G G G G G     C
    G         | + |                 T T
    G       A G G C
      T A          A     CGGGAGTAATCCCTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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