The detailed information of tRNA gene sequence


Sequence ID>WENV170018396
Genome IDBARW01008280
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 451
End posion on genome 375
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cttgttgagt
tRNA gene sequence 
AGGAGTGTAGCTCAGTTTGGGAGAGCAGCGGTCTCCAAAACCGCAGGGCGGGGGTTCGAG
TCCCTCCACTCCTGCCA
Downstream region at tRNA end position 
gactactgga
Secondary structure (Cloverleaf model)
>WENV170018396	Trp	CCA
                   t      GCCA gactactgga
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        A     AGGGC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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