The detailed information of tRNA gene sequence


Sequence ID>WENV170018407
Genome IDBARW01010435
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 287
End posion on genome 382
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
atgttagctA
tRNA gene sequence 
GGGAGCGTATAGGTCCTGGTGGGCTTCGCGGACTTCAAATCCGTTGGTGGGCACCTTTCG
GTGTCCACGGTGGTTCGATTCCTCCCGCTCCCGACt
Downstream region at tRNA end position 
ctaagaaaat
Secondary structure (Cloverleaf model)
>WENV170018407	SeC(p)	TCA
                   A      GACt ctaagaaaat
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T T
                    T     C C T C C     A
      C C T        A      | |   | |     G
    T       G G A T       G G T G G     C
    G         | |                   T T
    G       G C T T
      T G G        C     TGGTGGGCACCTTTCGGTGTCCAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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