The detailed information of tRNA gene sequence


Sequence ID>WENV170018410
Genome IDBARW01011207
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 445
End posion on genome 523
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
atttcctcgt
tRNA gene sequence 
CGGGATGTAGCGCAGCCTGGTTTAGCGCGCCTGCCTCGGGTGCAGGAGGTCGTGGGTTCA
AATCCCGCCATCCCGACCA
Downstream region at tRNA end position 
aaatgaagga
Secondary structure (Cloverleaf model)
>WENV170018410	Pro	CGG
                   t      ACCA aaatgaagga
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C G C C C     A
    C C G A        A      | + | | |     A
  T         C G C G       G T G G G     C
  G         | | | |                 T T
  G         G C G C
    T T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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