The detailed information of tRNA gene sequence


Sequence ID>WENV170018413
Genome IDBARW01012139
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 508
End posion on genome 433
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
atggactcgt
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGGAGAGCGCAGCGTTCGCAATGCTGAGGTCGGGGGTTCAAAT
CCCCTACCGTCCACCA
Downstream region at tRNA end position 
ttatgaattg
Secondary structure (Cloverleaf model)
>WENV170018413	Ala	CGC
                   t      ACCA ttatgaattg
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T C C C C     A
      T G A        A      + | | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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