The detailed information of tRNA gene sequence


Sequence ID>WENV170018414
Genome IDBARW01012235
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 71
End posion on genome 147
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attttaacgt
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCATAGGTTCAAA
TCCTATCCCCGCTACCA
Downstream region at tRNA end position 
atttaggctc
Secondary structure (Cloverleaf model)
>WENV170018414	Met	CAT
                   t      ACCA atttaggctc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A T C C     A
      T G A        G      | | | | |     A
    C       C G A G       A T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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