The detailed information of tRNA gene sequence


Sequence ID>WENV170018427
Genome IDBARW01015150
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 832
End posion on genome 760
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttttatgaaT
tRNA gene sequence 
GGGGATATAGCTTAATGGTAAAGTAACTGGTTCCAGCCCAGTTGATCTAAGTTCAATTCT
TAGTATTCCCATga
Downstream region at tRNA end position 
gaataatggg
Secondary structure (Cloverleaf model)
>WENV170018427	Trp	CCA
                   T      ATga gaataatggg
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     T - A
                     A - T          T T
                    T     G A T T C     A
        A A        A      | | | | |     A
      T     T T C G       C T A A G     C
      G     | | | +                 T T
      G     A A G T
        T A        A     TGAT
                    A - T
                    C - G
                    T - A
                    G - C
                    G - C
                  T       C
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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