The detailed information of tRNA gene sequence


Sequence ID>WENV170018428
Genome IDBARW01015747
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 113
End posion on genome 203
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggggagctga
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTTATGGTGCCGCTCTCGAAAAGCGGTCTCCGGTTTTTCCGG
AGCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gctatatata
Secondary structure (Cloverleaf model)
>WENV170018428	Ser	CGA
                   a      GCCA gctatatata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G       + | |                   T T
    T       T G G T
      T T A        G     TCTCCGGTTTTTCCGGAGC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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