The detailed information of tRNA gene sequence


Sequence ID>WENV170018433
Genome IDBARW01016956
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 663
End posion on genome 587
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tggctgatac
tRNA gene sequence 
TGCGGGGTAGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGTTGGTTCAAA
TCCAACCCCCGCTACCA
Downstream region at tRNA end position 
tcatatttcc
Secondary structure (Cloverleaf model)
>WENV170018433	Met	CAT
                   c      ACCA tcatatttcc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A A C C     A
      T G A        A      | | | | |     A
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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