The detailed information of tRNA gene sequence


Sequence ID>WENV170018449
Genome IDBARW01019815
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 201
End posion on genome 295
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
taattaagaa
tRNA gene sequence 
GGAGAGGTGGCTGAGCCCGGCTGAAAGCGCTCGACTCGAAATCGAGTAGGCGGGTAGTCC
CTGCCTCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
aaattaatag
Secondary structure (Cloverleaf model)
>WENV170018449	Ser	CGA
                   a      GCCA aaattaatag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C C G A        G      | | | | |     G
  C         G T C G       G C G G G     C
  G           | | |                 T T
  G         A A G C
    C T G A        G     TAGGCGGGTAGTCCCTGCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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