The detailed information of tRNA gene sequence


Sequence ID>WENV170018464
Genome IDBARW01021775
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 401
End posion on genome 474
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcggcaacac
tRNA gene sequence 
GGGAGTGTAGTGTAGTGGCAACACGGGTGGCTCCAGACCACCAGCTGGGGGTTCGATTCC
TTCCACTCCCGCCA
Downstream region at tRNA end position 
taaagtgttc
Secondary structure (Cloverleaf model)
>WENV170018464	Trp	CCA
                   c      GCCA taaagtgttc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T T
                    T     C T T C C     A
        G A        A      | + + | |     G
      T     T G T G       G G G G G     C
      G     | | | |                 T T
      G     A C A C
        C A        G     AGCT
                    G - C
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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