The detailed information of tRNA gene sequence


Sequence ID>WENV170018466
Genome IDBARW01022303
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 768
End posion on genome 692
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tttcttgggg
tRNA gene sequence 
CGGGGTGTGGCGCAGTCGGCTAGCGCGCAGCGTTTGGGACGCTGAGGTCGGAGGTTCGAG
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
tcaaattatt
Secondary structure (Cloverleaf model)
>WENV170018466	Pro	TGG
                   g      ACCA tcaaattatt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T C T C C     A
      T G A        G      + | | | |     G
    C       C G C G       G G A G G     C
    G       | | | |                 T T
    G       G C G C
      C T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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