The detailed information of tRNA gene sequence


Sequence ID>WENV170018468
Genome IDBARW01022411
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 614
End posion on genome 537
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
acgtctggga
tRNA gene sequence 
CGGAGCGTAGCGCAGCCTGGTTAGCGCACCAGTCTGGGGGACTGGGGGTCGGAGGTTCAA
ATCCTCTCGCTCCGACCA
Downstream region at tRNA end position 
attagatagc
Secondary structure (Cloverleaf model)
>WENV170018468	Pro	GGG
                   a      ACCA attagatagc
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    C C G A        A      + | | | |     A
  T         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          A     GGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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