The detailed information of tRNA gene sequence


Sequence ID>WENV170018476
Genome IDBARW01024665
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 197
End posion on genome 269
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aggctgattt
tRNA gene sequence 
GCGGAGGTGGCACAGTGGTTACTGCAATCGGTTGCAGCCCGGTTTTTCGTGGGTTCGAAT
CCCACCCTCCGCTtta
Downstream region at tRNA end position 
tgcgaagtgt
Secondary structure (Cloverleaf model)
>WENV170018476	Cys	GCA
                   t      Ttta tgcgaagtgt
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       C A C G       G T G G G     C
    G         | | |                 T T
    T       C T G C
      T A          A     TTTTC
                    A - T
                    T + G
                    C - G
                    G - C
                    G - C
                  T       C
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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