The detailed information of tRNA gene sequence


Sequence ID>WENV170018491
Genome IDBARW01027537
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 426
End posion on genome 517
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtctttgcct
tRNA gene sequence 
GGAGAGGTGGCAGAGTCTGGTTGAATGCGGCGGTCTTGAAAACCGTTGAAGGTTTATACC
TTCCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tgaagataat
Secondary structure (Cloverleaf model)
>WENV170018491	Ser	TGA
                   t      GCCA tgaagataat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  T         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    T T G A        G     TGAAGGTTTATACCTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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