The detailed information of tRNA gene sequence


Sequence ID>WENV170018492
Genome IDBARW01027559
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 617
End posion on genome 542
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gtgtccttat
tRNA gene sequence 
GGGGCTGTAGTTCAATCGGGAGAACGTTTGACTGGCAGTCAAAAGGTAGGGGGTTCGAAT
CCCCCCAGCTCCACCA
Downstream region at tRNA end position 
ggggttacca
Secondary structure (Cloverleaf model)
>WENV170018492	Ala	GGC
                   t      ACCA ggggttacca
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     C C C C C     A
      T A A        A      | | | | |     G
    C       C T T G       G G G G G     C
    G       | | | |                 T T
    G       G A A C
      G A          G     AGGTA
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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