The detailed information of tRNA gene sequence


Sequence ID>WENV170018500
Genome IDBARW01029057
Search identical group
Phylum/Class[BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula
Species
Start position on genome 94
End posion on genome 178
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtttaataag
tRNA gene sequence 
GCCGGGGTGGCCCAGTCTGGTACGGCGTTGGCCTGCTAAGCCAATGATCCTTTGGATCTC
GCGGGTTCAAATCCCGTCCCCGGCGtct
Downstream region at tRNA end position 
ttaacgattt
Secondary structure (Cloverleaf model)
>WENV170018500	Ser	GCT
                   g      Gtct ttaacgattt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G C C C     A
      T G A        G      + | | | |     A
    C       C C C G       G C G G G     C
    T         | | |                 T T
    G       C G G C
      G T A        G     TGATCCTTTGGATCTC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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